Linking Islet Cell Function and Identity from in vitro to in situ
Contact PI: Patrick MacDonald, PhD, University of Alberta (U01 DK120447)
Emma Lundberg, PhD, Investigator, KTH Royal Institute of Technology
Seung Kim, PhD, co-Investigator, Stanford University
Rafael Arrojo e Drigo, PhD, Investigator, Vanderbilt University (09/01/2020-present)
Martin Hetzer, PhD, Investigator, Salk Institute (09/15/2018-09/01/2020)
Stephen Quake, PhD, Investigator, Stanford University (09/15/2018-09/01/2019)
Marjan Slak Rupnik, PhD, Collaborator, Medical University of Vienna
Andraz Stozer, MD, PhD, Collaborator, University of Maribor
Patrik Rorsman, PhD, Collaborator, University of Oxford
Linford Briant, PhD, Collaborator, University of Oxford
Start Date: September 15, 2018
End Date: August 31, 2022
Abstract
In type 1 diabetes (T1D) insulin producing b-cells of the pancreatic islets of Langerhans are lost and secretion of the glucose-raising hormone glucagon from a-cells is dysregulated, contributing to hyperglycemia and impaired counter-regulation. Recent studies show heterogeneity within the b-cell and a-cell populations both in vitro and in situ. For example, b-cell sub-groups differ in their Ca2+ signaling and gene expression profiles, and maybe even in their ability to survive in T1D. Understanding the variability and plasticity of human islet cell function, and the relationship of this to components of the islet microenvironment such as vasculature or nerves, is important since this may provide avenues for the discovery of new treatments such as the protection or regeneration of b-cells. Our proposal will combine in-depth gene and protein expression profiling and functional assessment on a cell-by-cell basis to understand the underlying regulation of islet cell heterogeneity and will map these in relation to other islet cells types and components of the local environment. Integration of an in-house human islet isolation program, multi-dimensional cell imaging expertise, and single-cell dual functional and gene expression profiling will help accomplish the goal of obtaining a high-resolution understanding of islet cells within their local tissue architecture in health and diabetes.
Meet the Grant Team
Investigators |
Patrick MacDonald, PhDUniversity of Alberta |
Martin Hetzer, PhDSalk Institute |
Emma Lundberg, PhDKTH Royal Institute of Technology |
Seung Kim, PhDStanford University |
Stephen Quake, PhDStanford University |
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Collaborators |
Andraž Stožer, PhDUniversity of Maribor |
Linford Briant, PhDUniversity of Oxford
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Marjan Slak Rupnik, PhDMedical University of Vienna
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Patrik Rorsman, PhDUniversity of Oxford
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Research Staff |
Xiaoqing Dai, PhDUniversity of Alberta |
Jocelyn Fox, PhDUniversity of Alberta
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Publications
- HumanIslets.com: Improving accessibility, integration, and usability of human research islet data
- HumanIslets: An integrated platform for human islet data access and analysis
- Organ Mapping Antibody Panels: a community resource for standardized multiplexed tissue imaging
- Integrating genetics with single-cell multiomic measurements across disease states identifies mechanisms of beta cell dysfunction in type 2 diabetes
- The human α cell in health and disease
- Metabolic Messengers: glucagon
- Integration of single-cell multiomic measurements across disease states with genetics identifies mechanisms of beta cell dysfunction in type 2 diabetes
- The emerging landscape of spatial profiling technologies
- Ca2+ Oscillations, Waves, and Networks in Islets from Human Donors With and Without Type 2 Diabetes
- Weight Cycling Impairs Pancreatic Insulin Secretion but Does Not Perturb Whole-Body Insulin Action in Mice With Diet-Induced Obesity
- Aging compromises human islet beta cell function and identity by decreasing transcription factor activity and inducing ER stress
- Heterogenous impairment of α cell function in type 2 diabetes is linked to cell maturation state
- Single-Cell Transcriptomics Reveals a Conserved Metaplasia Program in Pancreatic Injury
- Cryopreservation and post-thaw characterization of dissociated human islet cells
- Microvessels enhance vascularization and function of transplanted insulin-producing cells
- Probing β-Cell Biology in Space and Time
- Combinatorial transcription factor profiles predict mature and functional human islet α and β cells
- Molecular and functional profiling of human islets: from heterogeneity to human phenotypes
- In vivo studies of glucagon secretion by human islets transplanted in mice
- Patch-Seq Links Single-Cell Transcriptomes to Human Islet Dysfunction in Diabetes